Serveur d'exploration Covid (26 mars)

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Co-infection with SARS-CoV-2 and Human Metapneumovirus.

Identifieur interne : 000990 ( Main/Exploration ); précédent : 000989; suivant : 000991

Co-infection with SARS-CoV-2 and Human Metapneumovirus.

Auteurs : Francine Touzard-Romo [États-Unis] ; Chantal Tapé [États-Unis] ; John R. Lonks [États-Unis]

Source :

RBID : pubmed:32192233

Descripteurs français

English descriptors

Abstract

The novel coronavirus (now called SARS-CoV-2) initially discovered in Wuhan, China, has now become a global pandemic. We describe a patient presenting to an Emergency Department in Rhode Island on March 12, 2020 with cough and shortness of breath after a trip to Jamaica. The patient underwent nasopharyngeal swab for a respiratory pathogen panel as well as SARS-CoV-2 RT-PCR. When the respiratory pathogen panel was positive for human metapneumovirus, the patient was treated and discharged. SARS-CoV-2 RT-PCR came back positive 24 hours later. Although respiratory viral co-infection is thought to be relatively uncommon in adults, this case reflects that SARS-CoV-2 testing algorithms that exclude patients who test positive for routine viral pathogens may miss SARS-CoV-2 co-infected patients.

PubMed: 32192233


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Co-infection with SARS-CoV-2 and Human Metapneumovirus.</title>
<author>
<name sortKey="Touzard Romo, Francine" sort="Touzard Romo, Francine" uniqKey="Touzard Romo F" first="Francine" last="Touzard-Romo">Francine Touzard-Romo</name>
<affiliation wicri:level="2">
<nlm:affiliation>Newport Hospital, Division of Infectious Diseases, Newport, RI.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<placeName>
<region type="state">Rhode Island</region>
</placeName>
<wicri:cityArea>Newport Hospital, Division of Infectious Diseases, Newport</wicri:cityArea>
</affiliation>
</author>
<author>
<name sortKey="Tape, Chantal" sort="Tape, Chantal" uniqKey="Tape C" first="Chantal" last="Tapé">Chantal Tapé</name>
<affiliation wicri:level="2">
<nlm:affiliation>Warren Alpert Medical School of Brown University, Providence, RI.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<placeName>
<region type="state">Rhode Island</region>
</placeName>
<wicri:cityArea>Warren Alpert Medical School of Brown University, Providence</wicri:cityArea>
</affiliation>
</author>
<author>
<name sortKey="Lonks, John R" sort="Lonks, John R" uniqKey="Lonks J" first="John R" last="Lonks">John R. Lonks</name>
<affiliation wicri:level="2">
<nlm:affiliation>Warren Alpert Medical School of Brown University, Miriam Hospital, Division of Infectious Diseases, Providence, RI.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<placeName>
<region type="state">Rhode Island</region>
</placeName>
<wicri:cityArea>Warren Alpert Medical School of Brown University, Miriam Hospital, Division of Infectious Diseases, Providence</wicri:cityArea>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2020">2020</date>
<idno type="RBID">pubmed:32192233</idno>
<idno type="pmid">32192233</idno>
<idno type="wicri:Area/PubMed/Corpus">000288</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000288</idno>
<idno type="wicri:Area/PubMed/Curation">000288</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000288</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000927</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000927</idno>
<idno type="wicri:Area/Ncbi/Merge">001314</idno>
<idno type="wicri:Area/Ncbi/Curation">001314</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">001314</idno>
<idno type="wicri:Area/Main/Merge">000992</idno>
<idno type="wicri:Area/Main/Curation">000990</idno>
<idno type="wicri:Area/Main/Exploration">000990</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Co-infection with SARS-CoV-2 and Human Metapneumovirus.</title>
<author>
<name sortKey="Touzard Romo, Francine" sort="Touzard Romo, Francine" uniqKey="Touzard Romo F" first="Francine" last="Touzard-Romo">Francine Touzard-Romo</name>
<affiliation wicri:level="2">
<nlm:affiliation>Newport Hospital, Division of Infectious Diseases, Newport, RI.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<placeName>
<region type="state">Rhode Island</region>
</placeName>
<wicri:cityArea>Newport Hospital, Division of Infectious Diseases, Newport</wicri:cityArea>
</affiliation>
</author>
<author>
<name sortKey="Tape, Chantal" sort="Tape, Chantal" uniqKey="Tape C" first="Chantal" last="Tapé">Chantal Tapé</name>
<affiliation wicri:level="2">
<nlm:affiliation>Warren Alpert Medical School of Brown University, Providence, RI.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<placeName>
<region type="state">Rhode Island</region>
</placeName>
<wicri:cityArea>Warren Alpert Medical School of Brown University, Providence</wicri:cityArea>
</affiliation>
</author>
<author>
<name sortKey="Lonks, John R" sort="Lonks, John R" uniqKey="Lonks J" first="John R" last="Lonks">John R. Lonks</name>
<affiliation wicri:level="2">
<nlm:affiliation>Warren Alpert Medical School of Brown University, Miriam Hospital, Division of Infectious Diseases, Providence, RI.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<placeName>
<region type="state">Rhode Island</region>
</placeName>
<wicri:cityArea>Warren Alpert Medical School of Brown University, Miriam Hospital, Division of Infectious Diseases, Providence</wicri:cityArea>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Rhode Island medical journal (2013)</title>
<idno type="eISSN">2327-2228</idno>
<imprint>
<date when="2020" type="published">2020</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Betacoronavirus (isolation & purification)</term>
<term>Coinfection</term>
<term>Cough (etiology)</term>
<term>Dyspnea (etiology)</term>
<term>Humans</term>
<term>Metapneumovirus (isolation & purification)</term>
<term>Middle Aged</term>
<term>Nasopharynx (virology)</term>
<term>Paramyxoviridae Infections (diagnosis)</term>
<term>Paramyxoviridae Infections (drug therapy)</term>
<term>Patient Isolation</term>
<term>Travel</term>
<term>Treatment Outcome</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Adulte d'âge moyen</term>
<term>Co-infection</term>
<term>Dyspnée (étiologie)</term>
<term>Humains</term>
<term>Infections à Paramyxoviridae (diagnostic)</term>
<term>Infections à Paramyxoviridae (traitement médicamenteux)</term>
<term>Isolement du patient</term>
<term>Metapneumovirus (isolement et purification)</term>
<term>Partie nasale du pharynx (virologie)</term>
<term>Résultat thérapeutique</term>
<term>Toux (étiologie)</term>
<term>Voyage</term>
</keywords>
<keywords scheme="MESH" qualifier="diagnosis" xml:lang="en">
<term>Paramyxoviridae Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="diagnostic" xml:lang="fr">
<term>Infections à Paramyxoviridae</term>
</keywords>
<keywords scheme="MESH" qualifier="drug therapy" xml:lang="en">
<term>Paramyxoviridae Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="etiology" xml:lang="en">
<term>Cough</term>
<term>Dyspnea</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en">
<term>Betacoronavirus</term>
<term>Metapneumovirus</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr">
<term>Metapneumovirus</term>
</keywords>
<keywords scheme="MESH" qualifier="traitement médicamenteux" xml:lang="fr">
<term>Infections à Paramyxoviridae</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr">
<term>Partie nasale du pharynx</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en">
<term>Nasopharynx</term>
</keywords>
<keywords scheme="MESH" qualifier="étiologie" xml:lang="fr">
<term>Dyspnée</term>
<term>Toux</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Coinfection</term>
<term>Humans</term>
<term>Middle Aged</term>
<term>Patient Isolation</term>
<term>Travel</term>
<term>Treatment Outcome</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Adulte d'âge moyen</term>
<term>Co-infection</term>
<term>Humains</term>
<term>Isolement du patient</term>
<term>Résultat thérapeutique</term>
<term>Voyage</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">The novel coronavirus (now called SARS-CoV-2) initially discovered in Wuhan, China, has now become a global pandemic. We describe a patient presenting to an Emergency Department in Rhode Island on March 12, 2020 with cough and shortness of breath after a trip to Jamaica. The patient underwent nasopharyngeal swab for a respiratory pathogen panel as well as SARS-CoV-2 RT-PCR. When the respiratory pathogen panel was positive for human metapneumovirus, the patient was treated and discharged. SARS-CoV-2 RT-PCR came back positive 24 hours later. Although respiratory viral co-infection is thought to be relatively uncommon in adults, this case reflects that SARS-CoV-2 testing algorithms that exclude patients who test positive for routine viral pathogens may miss SARS-CoV-2 co-infected patients.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>États-Unis</li>
</country>
<region>
<li>Rhode Island</li>
</region>
</list>
<tree>
<country name="États-Unis">
<region name="Rhode Island">
<name sortKey="Touzard Romo, Francine" sort="Touzard Romo, Francine" uniqKey="Touzard Romo F" first="Francine" last="Touzard-Romo">Francine Touzard-Romo</name>
</region>
<name sortKey="Lonks, John R" sort="Lonks, John R" uniqKey="Lonks J" first="John R" last="Lonks">John R. Lonks</name>
<name sortKey="Tape, Chantal" sort="Tape, Chantal" uniqKey="Tape C" first="Chantal" last="Tapé">Chantal Tapé</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Sante/explor/CovidV2/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000990 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000990 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Sante
   |area=    CovidV2
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:32192233
   |texte=   Co-infection with SARS-CoV-2 and Human Metapneumovirus.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:32192233" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a CovidV2 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Sat Mar 28 17:51:24 2020. Site generation: Sun Jan 31 15:35:48 2021